STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER74990.1Dimethylsulfoniopropionate lyase DddL. (227 aa)    
Predicted Functional Partners:
SES43092.1
Aminomethyltransferase; Belongs to the GcvT family.
     
 0.824
SER74924.1
Hypothetical protein.
       0.675
SER74950.1
Putative membrane protein.
       0.675
SER74975.1
Cytochrome c.
       0.675
SER74882.1
Cytochrome c oxidase subunit 2.
       0.652
SER74906.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
       0.652
SER94571.1
Putative quinone oxidoreductase, YhdH/YhfP family.
  
  
 0.563
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.489
SER66661.1
Prephenate dehydratase.
  
 
 0.429
SES07351.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  0.429
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.