Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER58065.1 | SER86588.1 | SAMN04490244_101563 | SAMN04490244_103308 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.458 |
SER58065.1 | SES23816.1 | SAMN04490244_101563 | SAMN04490244_10810 | Predicted dehydrogenase. | Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase. | 0.616 |
SER86510.1 | SER86533.1 | SAMN04490244_103304 | SAMN04490244_103305 | NAD binding domain of 6-phosphogluconate dehydrogenase. | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.896 |
SER86510.1 | SER86553.1 | SAMN04490244_103304 | SAMN04490244_103306 | NAD binding domain of 6-phosphogluconate dehydrogenase. | DNA-binding transcriptional regulator, FadR family. | 0.727 |
SER86510.1 | SER86577.1 | SAMN04490244_103304 | SAMN04490244_103307 | NAD binding domain of 6-phosphogluconate dehydrogenase. | Hypothetical protein. | 0.794 |
SER86510.1 | SER86588.1 | SAMN04490244_103304 | SAMN04490244_103308 | NAD binding domain of 6-phosphogluconate dehydrogenase. | Predicted dehydrogenase. | 0.736 |
SER86510.1 | SER86613.1 | SAMN04490244_103304 | SAMN04490244_103309 | NAD binding domain of 6-phosphogluconate dehydrogenase. | Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family. | 0.822 |
SER86510.1 | SER86670.1 | SAMN04490244_103304 | SAMN04490244_103312 | NAD binding domain of 6-phosphogluconate dehydrogenase. | Predicted lipoprotein. | 0.720 |
SER86533.1 | SER86510.1 | SAMN04490244_103305 | SAMN04490244_103304 | Uncharacterized conserved protein YgbK, DUF1537 family. | NAD binding domain of 6-phosphogluconate dehydrogenase. | 0.896 |
SER86533.1 | SER86553.1 | SAMN04490244_103305 | SAMN04490244_103306 | Uncharacterized conserved protein YgbK, DUF1537 family. | DNA-binding transcriptional regulator, FadR family. | 0.670 |
SER86533.1 | SER86577.1 | SAMN04490244_103305 | SAMN04490244_103307 | Uncharacterized conserved protein YgbK, DUF1537 family. | Hypothetical protein. | 0.780 |
SER86533.1 | SER86588.1 | SAMN04490244_103305 | SAMN04490244_103308 | Uncharacterized conserved protein YgbK, DUF1537 family. | Predicted dehydrogenase. | 0.686 |
SER86533.1 | SER86613.1 | SAMN04490244_103305 | SAMN04490244_103309 | Uncharacterized conserved protein YgbK, DUF1537 family. | Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family. | 0.789 |
SER86533.1 | SER86670.1 | SAMN04490244_103305 | SAMN04490244_103312 | Uncharacterized conserved protein YgbK, DUF1537 family. | Predicted lipoprotein. | 0.531 |
SER86553.1 | SER86510.1 | SAMN04490244_103306 | SAMN04490244_103304 | DNA-binding transcriptional regulator, FadR family. | NAD binding domain of 6-phosphogluconate dehydrogenase. | 0.727 |
SER86553.1 | SER86533.1 | SAMN04490244_103306 | SAMN04490244_103305 | DNA-binding transcriptional regulator, FadR family. | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.670 |
SER86553.1 | SER86577.1 | SAMN04490244_103306 | SAMN04490244_103307 | DNA-binding transcriptional regulator, FadR family. | Hypothetical protein. | 0.873 |
SER86553.1 | SER86588.1 | SAMN04490244_103306 | SAMN04490244_103308 | DNA-binding transcriptional regulator, FadR family. | Predicted dehydrogenase. | 0.777 |
SER86553.1 | SER86613.1 | SAMN04490244_103306 | SAMN04490244_103309 | DNA-binding transcriptional regulator, FadR family. | Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family. | 0.768 |
SER86553.1 | SER86670.1 | SAMN04490244_103306 | SAMN04490244_103312 | DNA-binding transcriptional regulator, FadR family. | Predicted lipoprotein. | 0.468 |
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