STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER96319.1Sodium/proton antiporter, CPA1 family. (415 aa)    
Predicted Functional Partners:
SER94099.1
EF hand.
   
 0.743
SES38409.1
Ca2+-binding protein, EF-hand superfamily.
   
 0.743
SER96369.1
Trans-2,3-dihydro-3-hydroxyanthranilate isomerase.
       0.729
SER96353.1
Uncharacterized membrane protein YebE, DUF533 family.
       0.719
fur
Manganese uptake regulator, Fur family; Belongs to the Fur family.
       0.594
SES15553.1
Kef-type potassium/proton antiporter, CPA2 family.
   
 
 0.545
SER96304.1
Microcin C transport system substrate-binding protein.
       0.522
SER96404.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.471
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
   0.439
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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