STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER99483.1PAS domain S-box-containing protein. (849 aa)    
Predicted Functional Partners:
SER53662.1
PAS domain S-box-containing protein.
 
0.999
SER70167.1
PAS domain S-box-containing protein.
 
0.999
SER70241.1
Hpt domain-containing protein.
  
 0.999
SER70483.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 0.999
SER85864.1
PAS fold-containing protein.
 
0.999
SER86255.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.999
SER99927.1
Signal transduction histidine kinase.
 
0.999
SES04291.1
Hypothetical protein.
  
 0.999
SES08592.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.999
SES14732.1
PAS fold-containing protein.
  
 0.999
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.