STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES07747.1DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. (1122 aa)    
Predicted Functional Partners:
SES07728.1
Double-strand break repair protein AddB.
 
  
 0.971
SER82259.1
Exodeoxyribonuclease-5.
  
 
 0.953
SES21583.1
Hypothetical protein.
  
 
 0.953
SES07670.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
     
 0.881
SES07692.1
Hypothetical protein.
       0.866
SES07706.1
Mannose-1-phosphate guanylyltransferase.
       0.866
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.807
SES07650.1
PAS fold.
 
     0.806
SES07763.1
Thioredoxin; Belongs to the thioredoxin family.
  
    0.761
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.689
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.