STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES13617.1TPR repeat-containing protein. (186 aa)    
Predicted Functional Partners:
SES13650.1
Tight adherence protein B.
 
  
 0.959
SES13583.1
Prepilin peptidase CpaA.
 
   
 0.953
SES13601.1
Flp pilus assembly protein TadD, contains TPR repeats.
 
     0.953
SES13683.1
Pilus assembly protein CpaE.
 
  
 0.953
SES13630.1
Tight adherence protein C.
 
  
 0.949
SES13570.1
Hypothetical protein.
 
     0.875
SES13666.1
Pilus assembly protein CpaF.
 
  
 0.857
SES13714.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.857
SES13730.1
Pilus assembly protein CpaB.
 
  
 0.810
SES13744.1
Hypothetical protein.
 
   
 0.800
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.