STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES21161.1Uncharacterized conserved protein YbjQ, UPF0145 family; Belongs to the UPF0145 family. (111 aa)    
Predicted Functional Partners:
SES21132.1
Iron-regulated ABC transporter membrane component SufB.
  
  
 0.892
SES21115.1
Cysteine desulfurase.
     
 0.875
SES21176.1
Fe-S cluster assembly ATP-binding protein.
  
  
 0.870
SES21215.1
Yip1 domain-containing protein.
     
 0.865
SES21194.1
Fe-S cluster assembly protein SufD.
  
  
 0.862
SES21231.1
Yip1 domain-containing protein.
     
 0.861
SES21146.1
Hypothetical protein.
       0.701
SES21098.1
Transcriptional regulator, BadM/Rrf2 family.
     
 0.698
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.697
SES21241.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.647
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.