STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES34553.1Predicted dehydrogenase. (383 aa)    
Predicted Functional Partners:
SES34577.1
Sugar phosphate isomerase/epimerase.
 
 
  0.960
SES34562.1
Protein of unknown function.
 
     0.946
SES36250.1
Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.680
SER86230.1
Sugar phosphate isomerase/epimerase.
  
 
  0.670
SES34538.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.662
SER71619.1
Hypothetical protein.
  
  
  0.643
SES34589.1
Predicted dehydrogenase.
  
     0.568
SER59074.1
Hypothetical protein.
  
  
  0.557
SES34603.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.535
SES41335.1
Sugar phosphate isomerase/epimerase.
  
 
  0.452
Your Current Organism:
Roseivivax roseus
NCBI taxonomy Id: 641238
Other names: DSM 23042, KCTC 22650, R. roseus, Roseivivax roseus Zhang et al. 2014, Roseivivax sp. BH87090, strain BH87090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.