Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000000063PALM2-AKAP2 fusion. (799 aa)    
Predicted Functional Partners:
LOC113148616
Paralemmin 1b.
    
 
 0.881
PALM
Paralemmin 1a.
    
 
 0.881
ENSATEP00000000080
Uncharacterized protein.
 
    
 0.768
LOC113171826
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.760
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
    
 
 0.760
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.760
LOC113158767
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 
 0.760
synm
Synemin, intermediate filament protein; Belongs to the intermediate filament family.
  
 
 
 0.717
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.707
thoc1
THO complex 1.
      
 0.706
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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