Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam171a1Family with sequence similarity 171 member A1. (891 aa)    
Predicted Functional Partners:
LOC113151002
Uncharacterized protein.
      
 0.706
ENSATEP00000003576
Uncharacterized protein.
      
 0.656
SMTN
Smoothelin.
      
 0.606
LOC113148386
Smoothelin a.
      
 0.606
ENSATEP00000001723
MutS homolog 5.
      
 0.604
ENSATEP00000001798
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
      
 0.517
fam110b
Family with sequence similarity 110 member B.
      
 0.490
nanp
N-acetylneuraminic acid phosphatase.
   
  
 0.477
LOC113169712
Lysine (K)-specific demethylase 6B, b.
      
 0.468
kdm6b
Lysine (K)-specific demethylase 6B, a.
      
 0.468
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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