STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113148364Si:busm1-57f23.1. (148 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.657
LOC113164073
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.649
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.565
LOC113160941
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.565
grn
Granulin b.
   
 0.531
LOC113153969
Uncharacterized protein.
   
 0.531
ENSATEP00000032071
Uncharacterized protein.
   
 0.531
ENSATEP00000024414
BH3 interacting domain death agonist.
     
  0.521
apaf1
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
    
 0.516
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.503
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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