LOC113162982 protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC113162982

Vesicle amine transport 1. (460 aa)

Predicted Functional Partners:

hsdl2

0.762

ENSATEP00000028232

0.651

ENSATEP00000033461

0.642

ENSATEP00000033910

0.642

LOC113164531

0.642

pigm

0.604

ndufab1

0.599

ENSATEP00000008055

0.599

scp2

0.590

olah

0.588

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000008055	ENSATEP00000033461	ENSATEP00000008055	ENSATEP00000033461	Uncharacterized protein.	Coiled-coil domain containing 57.	0.738
ENSATEP00000008055	ENSATEP00000033910	ENSATEP00000008055	ENSATEP00000033910	Uncharacterized protein.	Carrier domain-containing protein.	0.738
ENSATEP00000008055	LOC113162982	ENSATEP00000008055	ENSATEP00000001036	Uncharacterized protein.	Vesicle amine transport 1.	0.599
ENSATEP00000008055	LOC113164531	ENSATEP00000008055	ENSATEP00000033924	Uncharacterized protein.	Si:dkey-61p9.11.	0.738
ENSATEP00000008055	hsdl2	ENSATEP00000008055	ENSATEP00000033674	Uncharacterized protein.	Hydroxysteroid dehydrogenase like 2.	0.855
ENSATEP00000008055	ndufab1	ENSATEP00000008055	ENSATEP00000004958	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.665
ENSATEP00000008055	olah	ENSATEP00000008055	ENSATEP00000007603	Uncharacterized protein.	Oleoyl-ACP hydrolase.	0.770
ENSATEP00000008055	scp2	ENSATEP00000008055	ENSATEP00000000361	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.488
ENSATEP00000028232	LOC113162982	ENSATEP00000028232	ENSATEP00000001036	Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).	Vesicle amine transport 1.	0.651
ENSATEP00000028232	hsdl2	ENSATEP00000028232	ENSATEP00000033674	Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).	Hydroxysteroid dehydrogenase like 2.	0.765
ENSATEP00000028232	olah	ENSATEP00000028232	ENSATEP00000007603	Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).	Oleoyl-ACP hydrolase.	0.551
ENSATEP00000028232	scp2	ENSATEP00000028232	ENSATEP00000000361	Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.535
ENSATEP00000033461	ENSATEP00000008055	ENSATEP00000033461	ENSATEP00000008055	Coiled-coil domain containing 57.	Uncharacterized protein.	0.738
ENSATEP00000033461	LOC113162982	ENSATEP00000033461	ENSATEP00000001036	Coiled-coil domain containing 57.	Vesicle amine transport 1.	0.642
ENSATEP00000033461	hsdl2	ENSATEP00000033461	ENSATEP00000033674	Coiled-coil domain containing 57.	Hydroxysteroid dehydrogenase like 2.	0.756
ENSATEP00000033461	ndufab1	ENSATEP00000033461	ENSATEP00000004958	Coiled-coil domain containing 57.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.742
ENSATEP00000033461	olah	ENSATEP00000033461	ENSATEP00000007603	Coiled-coil domain containing 57.	Oleoyl-ACP hydrolase.	0.940
ENSATEP00000033461	scp2	ENSATEP00000033461	ENSATEP00000000361	Coiled-coil domain containing 57.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.421
ENSATEP00000033910	ENSATEP00000008055	ENSATEP00000033910	ENSATEP00000008055	Carrier domain-containing protein.	Uncharacterized protein.	0.738
ENSATEP00000033910	LOC113162982	ENSATEP00000033910	ENSATEP00000001036	Carrier domain-containing protein.	Vesicle amine transport 1.	0.642