STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM110AFamily with sequence similarity 110 member A. (475 aa)    
Predicted Functional Partners:
LOC113161078
Uncharacterized protein.
      
 0.789
rpap3
RNA polymerase II associated protein 3.
      
 0.693
ENSATEP00000017741
TM2 domain containing 2.
      
 0.680
ENSATEP00000011825
G patch domain and ankyrin repeats 1.
      
 0.587
snx29
Sorting nexin 29.
      
 0.517
TAFA1
TAFA chemokine like family member 1.
      
 0.482
ENSATEP00000029752
Uncharacterized protein.
      
 0.482
FAM135B
Family with sequence similarity 135 member B.
      
 0.469
ENSATEP00000029505
Family with sequence similarity 135 member A.
      
 0.469
SHKBP1
SH3KBP1 binding protein 1.
      
 0.448
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.