STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113165379Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
ENSATEP00000029849
NDK domain-containing protein.
    
   0.640
wdr90
WD repeat domain 90.
    
   0.515
srf
Serum response factor b.
    
 0.512
LOC113162031
MADS-box domain-containing protein.
    
 0.512
LOC113159194
LIM domain binding 1a.
    
 0.482
ldb2
LIM domain binding 2a.
    
 0.482
LOC113161252
LIM-domain binding 1b.
    
 0.482
ENSATEP00000010434
LIM homeobox 4.
    
  0.434
LHX3
LIM homeobox 3.
    
  0.434
ENSATEP00000006832
Uncharacterized protein.
    
   0.406
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.