Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sbf1SET binding factor 1. (1942 aa)    
Predicted Functional Partners:
rab21
RAB21, member RAS oncogene family.
    
 0.846
mtm1
Myotubularin 1.
    
 0.832
LOC113157919
Myotubularin related protein 1a.
    
 0.832
mtmr2
Myotubularin related protein 2.
    
 0.832
sh3tc2
SH3 domain and tetratricopeptide repeats 2.
      
 0.706
MTMR4
Myotubularin related protein 4.
    
 0.692
mtmr3
Myotubularin related protein 3.
    
 0.692
tcf20
Transcription factor 20.
    
 
 0.674
ENSATEP00000035793
Retinoic acid induced 1.
    
 
 0.674
ENSATEP00000000310
V-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b); Belongs to the bZIP family.
      
 0.671
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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