Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000001306Opticin. (235 aa)    
Predicted Functional Partners:
ENSATEP00000000570
Somatolactin alpha.
   
    0.760
GH1
Growth hormone 1.
   
    0.760
LOC113156823
Peripherin 2a (retinal degeneration, slow).
   
  
 0.715
LOC113149246
Uncharacterized protein.
   
  
 0.715
LOC113159441
Peripherin 2-like a.
   
  
 0.715
LOC113159181
Peripherin 2b (retinal degeneration, slow).
   
  
 0.715
ENSATEP00000027592
Nyctalopin.
    
 0.713
rae1
Ribonucleic acid export 1.
    
 
 0.710
lrr1
Zgc:77287.
      
 0.706
ENSATEP00000035752
R3H domain containing-like.
      
 0.706
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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