ENSATEP00000001348 protein (Anabas testudineus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSATEP00000001348

Reprimo-like. (106 aa)

Predicted Functional Partners:

ENSATEP00000028492

0.872

marveld1

0.628

telo2

0.469

actr8

0.468

LOC113155116

0.467

MYOC

0.466

gas2

0.466

myoc

0.466

fezf2

0.463

ENSATEP00000004786

0.460

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000001348	ENSATEP00000004786	ENSATEP00000001348	ENSATEP00000004786	Reprimo-like.	SMC5-SMC6 complex localization factor 1.	0.460
ENSATEP00000001348	ENSATEP00000028492	ENSATEP00000001348	ENSATEP00000028492	Reprimo-like.	Reprimo, TP53 dependent G2 arrest mediator candidate b.	0.872
ENSATEP00000001348	LOC113155116	ENSATEP00000001348	ENSATEP00000008067	Reprimo-like.	Polybromo 1.	0.467
ENSATEP00000001348	MYOC	ENSATEP00000001348	ENSATEP00000002748	Reprimo-like.	Myocilin.	0.466
ENSATEP00000001348	actr8	ENSATEP00000001348	ENSATEP00000011605	Reprimo-like.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.468
ENSATEP00000001348	fezf2	ENSATEP00000001348	ENSATEP00000000829	Reprimo-like.	FEZ family zinc finger 2.	0.463
ENSATEP00000001348	gas2	ENSATEP00000001348	ENSATEP00000017778	Reprimo-like.	Growth arrest-specific 2a.	0.466
ENSATEP00000001348	marveld1	ENSATEP00000001348	ENSATEP00000002018	Reprimo-like.	MARVEL domain containing 1.	0.628
ENSATEP00000001348	myoc	ENSATEP00000001348	ENSATEP00000024572	Reprimo-like.	Myocilin.	0.466
ENSATEP00000001348	telo2	ENSATEP00000001348	ENSATEP00000023294	Reprimo-like.	TEL2, telomere maintenance 2, homolog (S. cerevisiae).	0.469
ENSATEP00000004786	ENSATEP00000001348	ENSATEP00000004786	ENSATEP00000001348	SMC5-SMC6 complex localization factor 1.	Reprimo-like.	0.460
ENSATEP00000004786	LOC113155116	ENSATEP00000004786	ENSATEP00000008067	SMC5-SMC6 complex localization factor 1.	Polybromo 1.	0.444
ENSATEP00000004786	MYOC	ENSATEP00000004786	ENSATEP00000002748	SMC5-SMC6 complex localization factor 1.	Myocilin.	0.406
ENSATEP00000004786	actr8	ENSATEP00000004786	ENSATEP00000011605	SMC5-SMC6 complex localization factor 1.	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.	0.709
ENSATEP00000004786	gas2	ENSATEP00000004786	ENSATEP00000017778	SMC5-SMC6 complex localization factor 1.	Growth arrest-specific 2a.	0.501
ENSATEP00000004786	marveld1	ENSATEP00000004786	ENSATEP00000002018	SMC5-SMC6 complex localization factor 1.	MARVEL domain containing 1.	0.671
ENSATEP00000004786	myoc	ENSATEP00000004786	ENSATEP00000024572	SMC5-SMC6 complex localization factor 1.	Myocilin.	0.406
ENSATEP00000004786	telo2	ENSATEP00000004786	ENSATEP00000023294	SMC5-SMC6 complex localization factor 1.	TEL2, telomere maintenance 2, homolog (S. cerevisiae).	0.709
ENSATEP00000028492	ENSATEP00000001348	ENSATEP00000028492	ENSATEP00000001348	Reprimo, TP53 dependent G2 arrest mediator candidate b.	Reprimo-like.	0.872
LOC113155116	ENSATEP00000001348	ENSATEP00000008067	ENSATEP00000001348	Polybromo 1.	Reprimo-like.	0.467