STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000001544SPATA6 domain-containing protein. (88 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.646
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.617
pold1
DNA polymerase.
    
 0.588
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.584
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
  0.574
ndufa6
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  0.573
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
    
  0.566
ENSATEP00000005411
Si:dkey-28b4.7.
    
 0.565
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.565
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.558
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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