Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chmp2bCharged multivesicular body protein 2Bb. (216 aa)    
Predicted Functional Partners:
chmp5
Charged multivesicular body protein 5a.
   
 0.992
ENSATEP00000004718
Charged multivesicular body protein 5b.
   
 0.992
chmp2a
Charged multivesicular body protein 2A.
   
 0.992
chmp3
Charged multivesicular body protein 3.
   
 0.992
chmp1a
Charged multivesicular body protein 1A.
   
 0.990
ist1
IST1 factor associated with ESCRT-III.
   
 0.990
chmp1b
Chromatin modifying protein 1B.
   
 0.990
ENSATEP00000028168
Uncharacterized protein.
   
 0.990
chmp4c
Charged multivesicular body protein 4C.
   
 0.986
LOC113154299
Uncharacterized protein.
   
 0.986
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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