Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
rnf141Ring finger protein 141. (228 aa)    
Predicted Functional Partners:
cenpm
Proliferation associated nuclear element.
      
 0.710
samd11
Sterile alpha motif domain containing 11.
      
 0.690
LOC113162522
FIP1 like 1b (S. cerevisiae).
   
 
  0.679
cpsf1
Cleavage and polyadenylation specific factor 1.
     
  0.678
ENSATEP00000025458
Cleavage and polyadenylation specificity factor subunit 2.
     
  0.678
trip12
Thyroid hormone receptor interactor 12.
     
 0.640
ENSATEP00000005600
Spermatogenesis associated 4.
      
 0.628
LOC113147747
DUF4200 domain-containing protein.
      
 0.628
rnf14
RBR-type E3 ubiquitin transferase.
     
 0.615
LOC113148884
Cleavage and polyadenylation specific factor 3.
     
  0.596
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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