ENSATEP00000001657 protein (Anabas testudineus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSATEP00000001657

Actin binding LIM protein family, member 3. (634 aa)

Predicted Functional Partners:

ENSATEP00000029957

0.871

LOC113151700

0.816

LOC113151700-2

0.816

CDC42

0.816

dmtn

0.808

ENSATEP00000020108

0.808

ENSATEP00000034144

0.808

LOC113162060

0.777

RAC1

0.777

LOC113156741

0.777

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSATEP00000001657	ENSATEP00000034021	ENSATEP00000001657	Cell division cycle 42.	Actin binding LIM protein family, member 3.	0.816
CDC42	ENSATEP00000020108	ENSATEP00000034021	ENSATEP00000020108	Cell division cycle 42.	Actin binding LIM protein 1a.	0.733
CDC42	ENSATEP00000029957	ENSATEP00000034021	ENSATEP00000029957	Cell division cycle 42.	Actin binding LIM protein family, member 2.	0.872
CDC42	ENSATEP00000034144	ENSATEP00000034021	ENSATEP00000034144	Cell division cycle 42.	Dematin actin binding protein.	0.733
CDC42	LOC113156741	ENSATEP00000034021	ENSATEP00000033759	Cell division cycle 42.	Rac family small GTPase 3b.	0.861
CDC42	LOC113162060	ENSATEP00000034021	ENSATEP00000003673	Cell division cycle 42.	Rac family small GTPase 2.	0.861
CDC42	RAC1	ENSATEP00000034021	ENSATEP00000019242	Cell division cycle 42.	Rac family small GTPase 1.	0.861
CDC42	dmtn	ENSATEP00000034021	ENSATEP00000018081	Cell division cycle 42.	Dematin actin binding protein.	0.733
ENSATEP00000001657	CDC42	ENSATEP00000001657	ENSATEP00000034021	Actin binding LIM protein family, member 3.	Cell division cycle 42.	0.816
ENSATEP00000001657	ENSATEP00000020108	ENSATEP00000001657	ENSATEP00000020108	Actin binding LIM protein family, member 3.	Actin binding LIM protein 1a.	0.808
ENSATEP00000001657	ENSATEP00000029957	ENSATEP00000001657	ENSATEP00000029957	Actin binding LIM protein family, member 3.	Actin binding LIM protein family, member 2.	0.871
ENSATEP00000001657	ENSATEP00000034144	ENSATEP00000001657	ENSATEP00000034144	Actin binding LIM protein family, member 3.	Dematin actin binding protein.	0.808
ENSATEP00000001657	LOC113151700	ENSATEP00000001657	ENSATEP00000007460	Actin binding LIM protein family, member 3.	Cell division cycle 42.	0.816
ENSATEP00000001657	LOC113151700-2	ENSATEP00000001657	ENSATEP00000008047	Actin binding LIM protein family, member 3.	Cell division control protein 42 homolog.	0.816
ENSATEP00000001657	LOC113156741	ENSATEP00000001657	ENSATEP00000033759	Actin binding LIM protein family, member 3.	Rac family small GTPase 3b.	0.777
ENSATEP00000001657	LOC113162060	ENSATEP00000001657	ENSATEP00000003673	Actin binding LIM protein family, member 3.	Rac family small GTPase 2.	0.777
ENSATEP00000001657	RAC1	ENSATEP00000001657	ENSATEP00000019242	Actin binding LIM protein family, member 3.	Rac family small GTPase 1.	0.777
ENSATEP00000001657	dmtn	ENSATEP00000001657	ENSATEP00000018081	Actin binding LIM protein family, member 3.	Dematin actin binding protein.	0.808
ENSATEP00000020108	CDC42	ENSATEP00000020108	ENSATEP00000034021	Actin binding LIM protein 1a.	Cell division cycle 42.	0.733
ENSATEP00000020108	ENSATEP00000001657	ENSATEP00000020108	ENSATEP00000001657	Actin binding LIM protein 1a.	Actin binding LIM protein family, member 3.	0.808