Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alkbh4AlkB homolog 4, lysine demthylase. (275 aa)    
Predicted Functional Partners:
ENSATEP00000009787
Uncharacterized protein.
    
   0.946
egfr
Receptor protein-tyrosine kinase.
     
  0.870
cblb
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
     
  0.870
alkbh1
AlkB homolog 1, histone H2A dioxygenase.
   
  
 0.846
LOC113158451
Rap guanine nucleotide exchange factor (GEF) 1b.
     
  0.824
rapgef1
Uncharacterized protein.
     
  0.824
LOC113163507
Receptor protein-tyrosine kinase.
     
  0.822
mettl4
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.816
ENSATEP00000025611
N-6 adenine-specific DNA methyltransferase 1.
      
 0.790
LOC113169632
Uncharacterized protein.
     
  0.782
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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