Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP000000017615'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (959 aa)    
Predicted Functional Partners:
DXO
Decapping exoribonuclease.
   
 
 0.995
ENSATEP00000014156
5'-3' exoribonuclease 1.
    
 0.989
LOC113174148
CDKN2A interacting protein.
    
 
 0.986
supt5h
Transcription elongation factor SPT5.
   
 
 0.951
nol9
Nucleolar protein 9.
   
 
 0.946
exosc10
Exosome component 10.
   
 
 0.942
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.941
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.933
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 
 0.929
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.926
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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