STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113160648Si:dkey-208k4.2. (374 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.805
bdp1
SANT domain-containing protein.
    
 0.756
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
    
 
 0.740
ENSATEP00000036377
POC1 centriolar protein A.
    
 0.718
ENSATEP00000015908
General transcription factor IIIC, polypeptide 3.
    
 0.702
ENSATEP00000012056
BRF1 RNA polymerase III transcription initiation factor subunit b.
   
 0.699
LOC113148314
BRF1 RNA polymerase III transcription initiation factor subunit a.
   
 0.699
gtf3c5
General transcription factor IIIC, polypeptide 5.
    
 0.669
ENSATEP00000025535
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
  0.650
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 0.630
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.