Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
usp48Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family. (1048 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.969
ENSATEP00000019002
Nucleoporin 188.
    
   0.949
ENSATEP00000012856
TNF receptor-associated factor.
    
 0.898
ENSATEP00000017463
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.898
LOC113158849
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.898
ubac1
UBA domain containing 1.
    
   0.894
ENSATEP00000013013
Ring finger protein 123.
    
   0.880
ENSATEP00000008835
Ubiquitin B.
   
 0.832
uba6
Ubiquitin like modifier activating enzyme 6.
   
 
 0.824
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 
 0.824
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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