STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113174578Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
txndc11
Thioredoxin domain containing 11.
    
  0.877
LOC113167831
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
   0.724
ENSATEP00000001278
Fras1 related extracellular matrix 1a.
    
 0.549
LOC113152840
Fras1 related extracellular matrix 1b.
    
 0.549
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.529
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.516
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.516
LOC113152582
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
   0.515
LOC113147906
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
   0.515
fras1
Fraser extracellular matrix complex subunit 1.
   
 0.507
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.