Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam214aFamily with sequence similarity 214 member A. (1100 aa)    
Predicted Functional Partners:
WDR7
WD repeat domain 7.
      
 0.762
capsl
Calcyphosine-like b.
      
 0.723
rsl24d1
Ribosomal L24 domain containing 1.
      
 0.683
pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
      
 0.673
zfand2a
Zinc finger, AN1-type domain 2A.
      
 0.666
hmg20b
High mobility group 20B.
      
 0.655
LOC113151036
RING-type domain-containing protein.
      
 0.654
MEX3D
Mex-3 RNA binding family member D.
      
 0.654
LOC113172389
BTB (POZ) domain containing 2b.
      
 0.649
mblac1
Metallo-beta-lactamase domain containing 1.
      
 0.646
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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