Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
oxa1lOXA1L mitochondrial inner membrane protein. (524 aa)    
Predicted Functional Partners:
malsu1
Si:zfos-1192g2.3.
  
 0.955
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.953
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.948
ENSATEP00000014084
Mitochondrial ribosomal protein L47.
   
 
 0.931
mrpl45
Mitochondrial ribosomal protein L45.
   
 
 0.924
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.921
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.917
tufm
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.915
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.912
ENSATEP00000021888
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
   0.908
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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