Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
esrp1Epithelial splicing regulatory protein 1. (749 aa)    
Predicted Functional Partners:
LOC113174398
RNA binding protein, mRNA processing factor 2b.
    
 0.866
RBPMS
RNA binding protein, mRNA processing factor.
    
 
 0.811
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.618
LOC113173839
RAN binding protein 2.
    
   0.617
ENSATEP00000013028
Heterogeneous nuclear ribonucleoprotein M.
     
 0.579
ENSATEP00000004941
RRM domain-containing protein.
    
 0.573
SRSF10
Serine and arginine rich splicing factor 10.
    
 0.573
ENSATEP00000023658
Uncharacterized protein.
      
 0.552
sf3b4
Splicing factor 3b, subunit 4.
    
 
 0.526
LOC113156346
QKI, KH domain containing, RNA binding 2.
    
 0.520
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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