Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSBP4Single stranded DNA binding protein 4. (385 aa)    
Predicted Functional Partners:
arih1
RBR-type E3 ubiquitin transferase.
    
  0.844
LOC113159732
Membrane-associated ring finger (C3HC4) 5, like.
     
 0.833
marchf5
Membrane-associated ring finger (C3HC4) 5.
     
 0.833
siah1
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
     
 0.831
LOC113153817
Tax1 (human T-cell leukemia virus type I) binding protein 1a.
     
  0.822
tax1bp1
Tax1 (human T-cell leukemia virus type I) binding protein 1b.
     
  0.822
usp30
Ubiquitin carboxyl-terminal hydrolase.
     
  0.822
ENSATEP00000020021
Microtubule-associated protein 1 light chain 3 gamma, like.
     
  0.822
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
     
  0.822
LOC113158849
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
  0.822
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
Server load: low (26%) [HD]