Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arhgef25Uncharacterized protein. (650 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
   
 
  0.844
rxfp2
Relaxin family peptide receptor 2a.
     
  0.697
ENSATEP00000006803
Relaxin family peptide receptor 1.
     
  0.697
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
     
  0.697
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
     
  0.697
RAMP3
Receptor activity modifying protein 3.
     
  0.688
ramp2
Receptor (G protein-coupled) activity modifying protein 2.
     
  0.620
ENSATEP00000006114
G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.
     
  0.620
ENSATEP00000013798
Adenylate cyclase 9; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
     
  0.620
ENSATEP00000014222
Si:ch73-334d15.2.
     
  0.620
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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