Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
bace2Beta-secretase 2; Belongs to the peptidase A1 family. (505 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.931
LOC113173247
Amyloid beta (A4) precursor protein b.
    
 0.931
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.804
LOC113161474
Uncharacterized protein.
    
 0.794
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.794
LOC113161668
Uncharacterized protein.
    
 0.794
LOC113157337
Reticulon.
    
 0.782
ENSATEP00000018527
Reticulon.
    
 0.782
ENSATEP00000018546
Uncharacterized protein.
    
 0.782
ENSATEP00000020867
Reticulon.
    
 0.782
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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