ENSATEP00000002457 protein (Anabas testudineus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSATEP00000002457

RNA binding motif protein 28. (737 aa)

Predicted Functional Partners:

nifk

0.995

ENSATEP00000002242

0.994

ENSATEP00000014535

0.994

ebna1bp2

0.994

pdcd11

0.994

noc2l

0.993

nip7

0.993

ddx24

0.993

ENSATEP00000018229

0.992

rbm34

0.992

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000002242	ENSATEP00000002457	ENSATEP00000002242	ENSATEP00000002457	CCAAT enhancer binding protein zeta.	RNA binding motif protein 28.	0.994
ENSATEP00000002242	ENSATEP00000014535	ENSATEP00000002242	ENSATEP00000014535	CCAAT enhancer binding protein zeta.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.	0.980
ENSATEP00000002242	ENSATEP00000018229	ENSATEP00000002242	ENSATEP00000018229	CCAAT enhancer binding protein zeta.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.993
ENSATEP00000002242	ddx24	ENSATEP00000002242	ENSATEP00000032015	CCAAT enhancer binding protein zeta.	DEAD (Asp-Glu-Ala-Asp) box helicase 24.	0.987
ENSATEP00000002242	ebna1bp2	ENSATEP00000002242	ENSATEP00000029645	CCAAT enhancer binding protein zeta.	EBNA1 binding protein 2.	0.991
ENSATEP00000002242	nifk	ENSATEP00000002242	ENSATEP00000008844	CCAAT enhancer binding protein zeta.	Nucleolar protein interacting with the FHA domain of MKI67.	0.984
ENSATEP00000002242	nip7	ENSATEP00000002242	ENSATEP00000027724	CCAAT enhancer binding protein zeta.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.963
ENSATEP00000002242	noc2l	ENSATEP00000002242	ENSATEP00000026619	CCAAT enhancer binding protein zeta.	NOC2-like nucleolar associated transcriptional repressor.	0.999
ENSATEP00000002242	pdcd11	ENSATEP00000002242	ENSATEP00000030464	CCAAT enhancer binding protein zeta.	Programmed cell death 11.	0.996
ENSATEP00000002242	rbm34	ENSATEP00000002242	ENSATEP00000023867	CCAAT enhancer binding protein zeta.	RNA binding motif protein 34.	0.985
ENSATEP00000002457	ENSATEP00000002242	ENSATEP00000002457	ENSATEP00000002242	RNA binding motif protein 28.	CCAAT enhancer binding protein zeta.	0.994
ENSATEP00000002457	ENSATEP00000014535	ENSATEP00000002457	ENSATEP00000014535	RNA binding motif protein 28.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.	0.994
ENSATEP00000002457	ENSATEP00000018229	ENSATEP00000002457	ENSATEP00000018229	RNA binding motif protein 28.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.992
ENSATEP00000002457	ddx24	ENSATEP00000002457	ENSATEP00000032015	RNA binding motif protein 28.	DEAD (Asp-Glu-Ala-Asp) box helicase 24.	0.993
ENSATEP00000002457	ebna1bp2	ENSATEP00000002457	ENSATEP00000029645	RNA binding motif protein 28.	EBNA1 binding protein 2.	0.994
ENSATEP00000002457	nifk	ENSATEP00000002457	ENSATEP00000008844	RNA binding motif protein 28.	Nucleolar protein interacting with the FHA domain of MKI67.	0.995
ENSATEP00000002457	nip7	ENSATEP00000002457	ENSATEP00000027724	RNA binding motif protein 28.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.993
ENSATEP00000002457	noc2l	ENSATEP00000002457	ENSATEP00000026619	RNA binding motif protein 28.	NOC2-like nucleolar associated transcriptional repressor.	0.993
ENSATEP00000002457	pdcd11	ENSATEP00000002457	ENSATEP00000030464	RNA binding motif protein 28.	Programmed cell death 11.	0.994
ENSATEP00000002457	rbm34	ENSATEP00000002457	ENSATEP00000023867	RNA binding motif protein 28.	RNA binding motif protein 34.	0.992