Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clrn3Clarin 3. (228 aa)    
Predicted Functional Partners:
ccdc43
Coiled-coil domain containing 43.
    
   0.811
rnf24
Ring finger protein 24.
      
 0.801
LOC113165431
Engulfment and cell motility 3.
    
 0.794
LOC113153797
Engulfment and cell motility 1.
    
 0.794
LOC113154154
Engulfment and cell motility 2.
    
 0.794
LOC113170395
Uncharacterized protein.
    
 0.789
CRK
CRK proto-oncogene, adaptor protein.
    
 0.789
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.789
txndc9
Thioredoxin domain containing 9.
    
  0.756
ubox5
U-box domain containing 5.
      
 0.741
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.