Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hoxa5Homeobox A5a. (277 aa)    
Predicted Functional Partners:
hoxa3
Homeobox A4a.
   
  
 0.781
nfatc2
Nuclear factor of activated T cells 2a.
      
 0.709
ENSATEP00000033096
Homeobox C10a.
    
 
 0.687
hoxd10
Homeobox D10a.
    
 
 0.681
ENSATEP00000013692
Homeobox B2a.
   
 
 0.639
LOC113153847
Homeobox domain-containing protein.
   
 
 0.620
LOC113170146
Homeobox A2b.
   
 
 0.617
ENSATEP00000029051
Uncharacterized protein.
    
 
 0.558
ENSATEP00000013710
Homeobox B4a.
   
 
 0.522
lpcat2
Lysophosphatidylcholine acyltransferase 2.
      
 0.520
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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