Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc4Leucine rich repeat containing 4.2. (664 aa)    
Predicted Functional Partners:
LOC113158038
Netrin G2.
    
 0.936
ENSATEP00000022377
Netrin g2a.
    
 0.936
ENSATEP00000029900
Vav 3 guanine nucleotide exchange factor b.
    
 0.874
ENSATEP00000030687
Netrin g1a.
    
 0.874
ENSATEP00000026832
Leucine rich repeat containing 4.1.
     
  0.872
LOC113174646
Leucine rich repeat containing 4C, genome duplicate b.
     
  0.796
ENSATEP00000025839
Integrin beta; Belongs to the integrin beta chain family.
   
  0.710
ENSATEP00000002457
RNA binding motif protein 28.
      
 0.698
LOC113151951
Protein tyrosine phosphatase receptor type Sa.
   
 0.670
ENSATEP00000023581
Protein tyrosine phosphatase receptor type Sa.
   
 0.670
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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