Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf44Ring finger protein 44. (424 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.877
rps27a
Ubiquitin-like domain-containing protein.
    
 0.852
ENSATEP00000008835
Ubiquitin B.
    
 0.849
ENSATEP00000007810
Uncharacterized protein.
    
  0.821
LOC113160418
Cytoplasmic polyadenylation element binding protein 4a.
     
 0.777
pin4
Peptidyl-prolyl cis-trans isomerase.
    
 
 0.754
ubxn7
UBX domain protein 7.
   
 
 0.702
faf2
Fas associated factor family member 2.
    
 
 0.684
ENSATEP00000008810
Uncharacterized protein.
    
  0.669
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
  
 0.624
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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