STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113162601Uncharacterized protein. (612 aa)    
Predicted Functional Partners:
LOC113168033
Uncharacterized protein.
     
  0.871
ENSATEP00000034132
RING-type domain-containing protein.
     
  0.871
trim25
Tripartite motif containing 25.
     
  0.871
ENSATEP00000034909
Tripartite motif containing 107.
     
  0.871
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
    
 0.586
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.531
LOC113152580
SH2 domain-containing protein.
      
 0.469
ifih1
Interferon induced with helicase C domain 1.
   
 0.463
LOC113167876
Interferon regulatory factor 10.
    
 0.462
ENSATEP00000021331
Integral membrane protein 2Bb.
    
 
 0.408
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
Server load: low (36%) [HD]