Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113153817Tax1 (human T-cell leukemia virus type I) binding protein 1a. (949 aa)    
Predicted Functional Partners:
ENSATEP00000008835
Ubiquitin B.
   
  0.979
LOC113156292
NBR1 autophagy cargo receptor a.
   
 0.979
LOC113158062
NBR1 autophagy cargo receptor b.
   
 0.979
sqstm1
Sequestosome 1.
    
 0.976
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.972
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.956
calcoco2
SKICH domain-containing protein.
    
 0.954
optn
Optineurin.
   
 0.946
ENSATEP00000008810
Uncharacterized protein.
   
  0.945
LOC113166075
GABA(A) receptor-associated protein like 2.
   
 0.940
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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