Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vav2Vav 2 guanine nucleotide exchange factor. (846 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.934
LOC113158218
B cell linker.
    
 0.911
syk
Tyrosine-protein kinase.
   
 0.909
LOC113152657
Zeta chain of T cell receptor associated protein kinase 70.
   
 0.909
LOC113150065
Uncharacterized protein.
    
  0.900
ENSATEP00000023418
Uncharacterized protein.
    
  0.893
LOC113171643
Uncharacterized protein.
    
  0.893
LOC113151700
Cell division cycle 42.
   
 0.881
LOC113151700-2
Cell division control protein 42 homolog.
   
 0.881
CDC42
Cell division cycle 42.
   
 0.881
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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