Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113148021Syntaxin 11a. (295 aa)    
Predicted Functional Partners:
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.987
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.948
LOC113148942
Syntaxin 11b, tandem duplicate 2.
  
  
 
0.939
vamp4
Vesicle-associated membrane protein 4.
    
 0.937
STX19
Syntaxin 19.
     
 
0.932
vamp8
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.926
LOC113148880
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.925
LOC113173747
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.916
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.904
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
    
0.901
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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