Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113173155Rho GTPase activating protein 20. (1144 aa)    
Predicted Functional Partners:
LOC113167989
Uncharacterized protein.
   
 0.676
LOC113154257
Uncharacterized protein.
   
 0.676
RHOB
Ras homolog family member B.
   
 0.676
LOC113167010
Uncharacterized protein.
   
 0.676
LOC113167459
Uncharacterized protein.
   
 0.676
LOC113167461
Uncharacterized protein.
   
 0.676
LOC113155463
Ras homolog family member Ca.
   
 0.676
ENSATEP00000030611
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
      
 0.671
LOC113157097
Zgc:92429.
      
 0.667
nemp1
Nuclear envelope integral membrane protein 1.
      
 0.662
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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