Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113174777Vacuole membrane protein 1. (404 aa)    
Predicted Functional Partners:
becn1
Beclin 1, autophagy related.
   
 0.947
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
 0.934
tp53inp2
Uncharacterized protein.
     
 0.899
LOC113174549
Si:ch211-260e23.9.
     
  0.871
tp53inp1
Tumor protein p53 inducible nuclear protein 1.
     
 0.859
tmem64
Transmembrane protein 64.
    
 
 0.735
tmem41b
Transmembrane protein 41B.
    
 
 0.721
ENSATEP00000005235
Activator of transcription and developmental regulator AUTS2 a.
      
 0.704
LOC113174548
Zgc:162297.
     
  0.698
gas6
Uncharacterized protein.
      
 0.655
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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