Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113169780Dachsous cadherin-related 1b. (3302 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 0.884
ENSATEP00000030572
Protocadherin-related 15b.
   
0.824
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.819
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.819
ENSATEP00000027609
Uncharacterized protein.
    
 0.819
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.811
ENSATEP00000010753
Uncharacterized protein.
    
 0.770
LOC113154366
Uncharacterized protein.
    
 0.770
ENSATEP00000029552
Junction plakoglobin a.
    
 0.770
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
    
0.739
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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