STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113161460C1q domain-containing protein. (224 aa)    
Predicted Functional Partners:
LOC113155100
Complement C1q C chain.
   
  0.596
ENSATEP00000024925
WD_REPEATS_REGION domain-containing protein.
    
  0.579
ENSATEP00000025016
TROVE domain-containing protein.
    
  0.579
ENSATEP00000025559
DUF4062 domain-containing protein.
    
  0.579
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.541
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
  0.519
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.517
ENSATEP00000012796
Uncharacterized protein.
    
  0.509
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.509
rps27a
Ubiquitin-like domain-containing protein.
    
  0.501
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.