Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113156855GTP cyclohydrolase 2. (258 aa)    
Predicted Functional Partners:
gchfr
GTP cyclohydrolase I feedback regulator.
    
 0.972
pts
6-pyruvoyl tetrahydrobiopterin synthase.
  
 
 0.948
mocs1
Molybdenum cofactor synthesis 1.
    
 0.907
ENSATEP00000029849
NDK domain-containing protein.
   
  0.893
LOC113156037
Nucleoside diphosphate kinase.
   
 0.891
ENSATEP00000003646
Nucleoside diphosphate kinase.
   
  0.889
nme3
Nucleoside diphosphate kinase.
   
  0.889
LOC113159112
NDK domain-containing protein; Belongs to the NDK family.
   
  0.889
nme6
Nucleoside diphosphate kinase.
   
  0.886
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
  0.886
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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