Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113154744Uncharacterized protein. (1469 aa)    
Predicted Functional Partners:
rubcn
Rubicon autophagy regulator.
    
 0.563
LOC113171145
Ras-related GTP binding A.
    
 
 0.547
uhmk1
U2AF homology motif (UHM) kinase 1.
      
 0.526
ENSATEP00000018483
RAB4B, member RAS oncogene family.
    
  0.526
rab4a
RAB4a, member RAS oncogene family.
    
  0.526
LOC113162609
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.519
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.519
micu2
Mitochondrial calcium uptake 2.
   
 0.517
micu1
Mitochondrial calcium uptake 1.
   
 0.517
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.513
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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