ENSATEP00000003670 protein (Anabas testudineus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSATEP00000003670

Uncharacterized protein. (49 aa)

Predicted Functional Partners:

ctnnb1

0.916

LOC113154366

0.872

leo1

0.794

ssrp1

0.774

supt16h

0.770

rtf1

0.768

ash2l

0.720

rbbp5

0.711

setd2

0.686

ENSATEP00000010753

0.682

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000003670	ENSATEP00000010753	ENSATEP00000003670	ENSATEP00000010753	Uncharacterized protein.	Uncharacterized protein.	0.682
ENSATEP00000003670	LOC113154366	ENSATEP00000003670	ENSATEP00000024506	Uncharacterized protein.	Uncharacterized protein.	0.872
ENSATEP00000003670	ash2l	ENSATEP00000003670	ENSATEP00000007585	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.720
ENSATEP00000003670	ctnnb1	ENSATEP00000003670	ENSATEP00000035485	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.916
ENSATEP00000003670	leo1	ENSATEP00000003670	ENSATEP00000024912	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.794
ENSATEP00000003670	rbbp5	ENSATEP00000003670	ENSATEP00000003066	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.711
ENSATEP00000003670	rtf1	ENSATEP00000003670	ENSATEP00000030591	Uncharacterized protein.	RTF1 homolog, Paf1/RNA polymerase II complex component.	0.768
ENSATEP00000003670	setd2	ENSATEP00000003670	ENSATEP00000006483	Uncharacterized protein.	SET domain containing 2, histone lysine methyltransferase.	0.686
ENSATEP00000003670	ssrp1	ENSATEP00000003670	ENSATEP00000018082	Uncharacterized protein.	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	0.774
ENSATEP00000003670	supt16h	ENSATEP00000003670	ENSATEP00000017992	Uncharacterized protein.	SPT16 homolog, facilitates chromatin remodeling subunit.	0.770
ENSATEP00000010753	ENSATEP00000003670	ENSATEP00000010753	ENSATEP00000003670	Uncharacterized protein.	Uncharacterized protein.	0.682
ENSATEP00000010753	ash2l	ENSATEP00000010753	ENSATEP00000007585	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.695
ENSATEP00000010753	ctnnb1	ENSATEP00000010753	ENSATEP00000035485	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.994
ENSATEP00000010753	leo1	ENSATEP00000010753	ENSATEP00000024912	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.651
ENSATEP00000010753	rbbp5	ENSATEP00000010753	ENSATEP00000003066	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.753
LOC113154366	ENSATEP00000003670	ENSATEP00000024506	ENSATEP00000003670	Uncharacterized protein.	Uncharacterized protein.	0.872
LOC113154366	ash2l	ENSATEP00000024506	ENSATEP00000007585	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.695
LOC113154366	ctnnb1	ENSATEP00000024506	ENSATEP00000035485	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.914
LOC113154366	leo1	ENSATEP00000024506	ENSATEP00000024912	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.651
LOC113154366	rbbp5	ENSATEP00000024506	ENSATEP00000003066	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.753