Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSATEP00000003688Ig-like domain-containing protein; Belongs to the MHC class I family. (334 aa)    
Predicted Functional Partners:
LOC113164746
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
    
  0.854
LOC113164593
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
    
  0.850
ENSATEP00000034401
CD8a molecule.
    
  0.836
LOC113152974
Calreticulin.
     
  0.796
LOC113155201
Protein disulfide-isomerase.
     
  0.796
LOC113172375
Calreticulin 3b.
     
  0.796
pdia3
Protein disulfide-isomerase.
     
  0.796
LOC113153372
IGv domain-containing protein.
     
  0.796
rpa2
Replication protein A2.
    
  0.756
LOC113152806
Calreticulin.
     
  0.697
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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