Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mmp2Matrix metallopeptidase 2. (654 aa)    
Predicted Functional Partners:
LOC113157696
Matrix metallopeptidase 14a (membrane-inserted).
   
  0.898
ENSATEP00000010411
Matrix metallopeptidase 14b (membrane-inserted).
   
 0.897
timp2
TIMP metallopeptidase inhibitor 2a.
   
 0.896
hbegf
Heparin-binding EGF-like growth factor a.
    
 0.883
ENSATEP00000001707
Vascular endothelial growth factor Aa; Belongs to the PDGF/VEGF growth factor family.
     
 0.832
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.823
areg
Amphiregulin.
     
  0.822
mmp9
Matrix metallopeptidase 9.
   
 0.809
edn1
Endothelin 1.
     
 0.738
LOC113162917
TIMP metallopeptidase inhibitor 2b.
   
 0.737
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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